Felipe Vaz Peres

I'm a M.Sc. student in bioinformatics at the Center for Nuclear Energy in Agriculture - University of São Paulo, working in the LabBCES.

My research focuses on understanding the variability of ncRNAs in sugarcane and their functional roles.

Before grad school, I was an undergraduate student in biotechnology at the University of São Carlos.

I can be reached via email at  felipe.vzps (at) gmail (dot) com

Research projects

• Sugarcane pan-RNAome
  Code
  Multi-genotype analyses of long-ncRNAs in Sugarcane.
• Sugarcane pan-transcriptome
  Code / Presentation / Poster
  Inference and annotation of the sugarcane pan-transcriptome.
• seabed-symphony
  Code / Documentation
  Metagenomics pipeline designed for BGCs identification.
• Yet Another Auto Transcript Assembly Pipeline
  Code
  Fully automated pipeline for de novo transcriptome assembly.
• ContFree-NGS
  Code / Presentation / Paper
  Tool designed to remove contaminant sequences from NGS datasets.

Side projects

• paper-trackr
  Code / Package / Demo
  Tired of missing out on cool papers? stay up to date with paper-trackr!
• fun-MNIST
  Code
  A simple neural network built from scratch.
• indeed jobs
  Code / Demo
  Automated web scraping to extract job listings from Indeed.

Miscellany

• Curriculum Vitae
• GitHub profile
• Google Scholar profile